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A0A371IS30 · A0A371IS30_9FIRM

  • Protein
    dTDP-4-dehydrorhamnose 3,5-epimerase
  • Gene
    rfbC
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Pathway

Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.

Features

Showing features for active site, site.

Type
IDPosition(s)Description
Active site64Proton acceptor
Active site133Proton donor
Site139Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular FunctiondTDP-4-dehydrorhamnose 3,5-epimerase activity
Biological ProcessdTDP-rhamnose biosynthetic process
Biological Processextracellular polysaccharide biosynthetic process

Keywords

  • Molecular function

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    dTDP-4-dehydrorhamnose 3,5-epimerase
  • EC number
  • Alternative names
    • Thymidine diphospho-4-keto-rhamnose 3,5-epimerase

Gene names

    • Name
      rfbC
    • ORF names
      CHF27_009020

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • CCRI-22766
  • Taxonomic lineage
    Bacteria > Bacillota > Clostridia > Peptostreptococcales > Peptostreptococcaceae > Romboutsia

Accessions

  • Primary accession
    A0A371IS30

Proteomes

Subcellular Location

Interaction

Subunit

Homodimer.

Family & Domains

Sequence similarities

Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    190
  • Mass (Da)
    22,255
  • Last updated
    2018-11-07 v1
  • MD5 Checksum
    D6E41FEA03D90F1CA2BDC52DAA3A1514
MGNFNFIKTKIEDLYIIEPKVFGDERGYFMETYNKNDFFEAGLRMEFVQDNESKSKKGVLRGMHFQTKHTQGKLVRVTEGEVYDVAVDLRKGSPTFGKWEGVLLTSANKRQFYVPEGFAHGFLVVSDEAVFNYKCTDFYAPEYDSGLLWDDEDVNIKWPLENIEEIILSEKDKKQRKLKELEIPFEYRGE

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
NOJZ02000015
EMBL· GenBank· DDBJ
RDY23275.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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