A0A2N3DTX6 · A0A2N3DTX6_9PROT
- Protein4-hydroxy-3-methylbut-2-enyl diphosphate reductase
- GeneispH
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids318 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.
Catalytic activity
- isopentenyl diphosphate + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O = (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 reduced [2Fe-2S]-[ferredoxin] + 2 H+
Cofactor
Note: Binds 1 [4Fe-4S] cluster per subunit.
Pathway
Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from (2E)-4-hydroxy-3-methylbutenyl diphosphate: step 1/1.
Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 6/6.
Features
Showing features for binding site, active site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 21 | [4Fe-4S] cluster (UniProtKB | ChEBI) | |||
Binding site | 50 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 50 | dimethylallyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 50 | isopentenyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 83 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 83 | dimethylallyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 83 | isopentenyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 105 | [4Fe-4S] cluster (UniProtKB | ChEBI) | |||
Binding site | 133 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 133 | dimethylallyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 133 | isopentenyl diphosphate (UniProtKB | ChEBI) | |||
Active site | 135 | Proton donor | |||
Binding site | 174 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 204 | [4Fe-4S] cluster (UniProtKB | ChEBI) | |||
Binding site | 232 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 232 | dimethylallyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 232 | isopentenyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 233 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 233 | dimethylallyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 233 | isopentenyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 234 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 234 | dimethylallyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 234 | isopentenyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 277 | (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 277 | dimethylallyl diphosphate (UniProtKB | ChEBI) | |||
Binding site | 277 | isopentenyl diphosphate (UniProtKB | ChEBI) | |||
GO annotations
Aspect | Term | |
---|---|---|
Molecular Function | 4 iron, 4 sulfur cluster binding | |
Molecular Function | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity | |
Molecular Function | metal ion binding | |
Biological Process | dimethylallyl diphosphate biosynthetic process | |
Biological Process | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | |
Biological Process | terpenoid biosynthetic process |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended name4-hydroxy-3-methylbut-2-enyl diphosphate reductase
- EC number
- Short namesHMBPP reductase
Gene names
Organism names
- Strain
- Taxonomic lineageBacteria > Pseudomonadota > Alphaproteobacteria
Accessions
- Primary accessionA0A2N3DTX6
Proteomes
Structure
Sequence
- Sequence statusComplete
- Length318
- Mass (Da)34,061
- Last updated2018-04-25 v1
- MD5 Checksum67F0F3BFD6191003940C706AC59BA1B6
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
PHEN01000970 EMBL· GenBank· DDBJ | PKP99494.1 EMBL· GenBank· DDBJ | Genomic DNA |