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A0A1E4ND62 · A0A1E4ND62_9PROT
Protein
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
Gene
rlmD
Status
UniProtKB unreviewed (TrEMBL)
Organism
Thiobacillus sp. SCN 65-179
Amino acids
432
(go to sequence)
Protein existence
Inferred from homology
Annotation score
2/5
Entry
Variant viewer
Feature viewer
Genomic coordinates
Publications
External links
History
External Links
Enzyme and pathway databases
ENZYME
Search…
Family and domain databases
CDD
cd02440
AdoMet_MTases 1 hit
Gene3D
2.40.50.1070
1 hit
2.40.50.140
Nucleic acid-binding proteins 1 hit
3.40.50.150
Vaccinia Virus protein VP39 1 hit
HAMAP
MF_01010
23SrRNA_methyltr_RlmD 1 hit
InterPro
View protein in InterPro
IPR001566
23S_rRNA_MeTrfase_RlmD
IPR030390
MeTrfase_TrmA_AS
IPR012340
NA-bd_OB-fold
IPR029063
SAM-dependent_MTases_sf
More InterPro links
PANTHER
PTHR11061:SF49
23S RRNA (URACIL
1939
-C
5
)-METHYLTRANSFERASE RLMD 1 hit
PTHR11061
RNA M5U METHYLTRANSFERASE 1 hit
PROSITE
View protein in PROSITE
PS51687
SAM_MT_RNA_M5U 1 hit
PS50926
TRAM 1 hit
PS01230
TRMA_1 1 hit
Pfam
View protein in Pfam
PF01938
TRAM 1 hit
PF05958
tRNA_U5-meth_tr 1 hit
SUPFAM
SSF50249
Nucleic acid-binding proteins 1 hit
SSF53335
S-adenosyl-L-methionine-dependent methyltransferases 1 hit
MobiDB
Search…
Protein-protein interaction databases
STRING
1660144.ABT21_08760
Sequence databases
Nucleotide Sequence
Protein Sequence
Molecule Type
Status
MEGN01000003
EMBL
·
GenBank
·
DDBJ
ODU89765.1
EMBL
·
GenBank
·
DDBJ
Genomic DNA
3D structure databases
AlphaFoldDB
A0A1E4ND62
ModBase
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