Q9CAZ7 · SSL5_ARATH

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosol
Cellular Componentendoplasmic reticulum
Cellular Componentvacuole
Biological Processbiosynthetic process
Biological Processresponse to ethylene
Biological Processresponse to fungus
Biological Processresponse to jasmonic acid
Biological Processresponse to salicylic acid
Biological Processresponse to virus

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Protein STRICTOSIDINE SYNTHASE-LIKE 5
  • Short names
    AtSSL5
  • Alternative names
    • Protein YELLOW-LEAF-SPECIFIC GENE 2

Gene names

    • Name
      SSL5
    • Synonyms
      YLS2
    • ORF names
      F26O13.70
    • Ordered locus names
      At3g51430

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9CAZ7
  • Secondary accessions
    • Q9SD06

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for signal, chain, glycosylation, modified residue.

TypeIDPosition(s)Description
Signal1-23
ChainPRO_000042470224-371Protein STRICTOSIDINE SYNTHASE-LIKE 5
Glycosylation101N-linked (GlcNAc...) asparagine
Glycosylation137N-linked (GlcNAc...) asparagine
Modified residue303Phosphotyrosine

Keywords

Proteomic databases

PTM databases

Expression

Tissue specificity

Expressed in cauline leaves and flowers.

Induction

By salicylic acid (SA), jasmonic acid (MJ), ethylene, abscisic acid (ABA), dark and infection with the fungal pathogen A.brassicicola and cucumber mosaic virus (CMV).

Developmental stage

Up-regulated in leaves during natural senescence.

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Sequence similarities

Belongs to the strictosidine synthase family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.

This entry describes 1 isoforms produced by Alternative splicing. A number of isoforms are produced. According to EST sequences.

Q9CAZ7-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    371
  • Mass (Da)
    41,642
  • Last updated
    2001-06-01 v1
  • Checksum
    AA33CD77BF218763
MPMFYSSRFLFFFTIVPLLVSIALYQLDTFDPAPVPSEAYASSTTSIPPLISDKYLTGAEFIGVGLLDKPEDIAYHQDSNLIYTGCIDGWVKRVSVHDSANDSVVEDWVNTGGRPLGIAFGVHGEVIVADAYKGLLNISGDGKKTELLTDQAEGVKFKLTDVVAVADNGVLYFTDASYKYTLHQVKFDILEGKPHGRLMSFDPTTRVTRVLLKDLYFANGVSMSPDQTHLIFCETPMRRCSKYYINEERVEVFIQGLPGYPDNIRYDGDGHYWIAMVSGASTLWRLSMKYPFLRKITAIAAKYGVELMFMKNAGVLQVDLDGNPIAYYHDQRLSHITTGIKIGNYLYCGNILHSYIIRLDLLKYPAQKKKL

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
F4J3D0F4J3D0_ARATHYLS2369

Sequence caution

The sequence CAB63007.1 differs from that shown. Reason: Erroneous gene model prediction

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AB047805
EMBL· GenBank· DDBJ
BAB32882.1
EMBL· GenBank· DDBJ
mRNA
AL133452
EMBL· GenBank· DDBJ
CAB63007.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
CP002686
EMBL· GenBank· DDBJ
AEE78791.1
EMBL· GenBank· DDBJ
Genomic DNA
AY065039
EMBL· GenBank· DDBJ
AAL57676.1
EMBL· GenBank· DDBJ
mRNA
AF462858
EMBL· GenBank· DDBJ
AAL58944.1
EMBL· GenBank· DDBJ
mRNA
BT010753
EMBL· GenBank· DDBJ
AAR23723.1
EMBL· GenBank· DDBJ
mRNA
AY087326
EMBL· GenBank· DDBJ
AAM64876.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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