Q9CAZ7 · SSL5_ARATH
- ProteinProtein STRICTOSIDINE SYNTHASE-LIKE 5
- GeneSSL5
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids371 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score4/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytosol | |
Cellular Component | endoplasmic reticulum | |
Cellular Component | vacuole | |
Biological Process | biosynthetic process | |
Biological Process | response to ethylene | |
Biological Process | response to fungus | |
Biological Process | response to jasmonic acid | |
Biological Process | response to salicylic acid | |
Biological Process | response to virus |
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameProtein STRICTOSIDINE SYNTHASE-LIKE 5
- Short namesAtSSL5
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9CAZ7
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for signal, chain, glycosylation, modified residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-23 | |||||
Sequence: MPMFYSSRFLFFFTIVPLLVSIA | ||||||
Chain | PRO_0000424702 | 24-371 | Protein STRICTOSIDINE SYNTHASE-LIKE 5 | |||
Sequence: LYQLDTFDPAPVPSEAYASSTTSIPPLISDKYLTGAEFIGVGLLDKPEDIAYHQDSNLIYTGCIDGWVKRVSVHDSANDSVVEDWVNTGGRPLGIAFGVHGEVIVADAYKGLLNISGDGKKTELLTDQAEGVKFKLTDVVAVADNGVLYFTDASYKYTLHQVKFDILEGKPHGRLMSFDPTTRVTRVLLKDLYFANGVSMSPDQTHLIFCETPMRRCSKYYINEERVEVFIQGLPGYPDNIRYDGDGHYWIAMVSGASTLWRLSMKYPFLRKITAIAAKYGVELMFMKNAGVLQVDLDGNPIAYYHDQRLSHITTGIKIGNYLYCGNILHSYIIRLDLLKYPAQKKKL | ||||||
Glycosylation | 101 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 137 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Modified residue | 303 | Phosphotyrosine | ||||
Sequence: Y |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Tissue specificity
Expressed in cauline leaves and flowers.
Induction
By salicylic acid (SA), jasmonic acid (MJ), ethylene, abscisic acid (ABA), dark and infection with the fungal pathogen A.brassicicola and cucumber mosaic virus (CMV).
Developmental stage
Up-regulated in leaves during natural senescence.
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
This entry describes 1 isoforms produced by Alternative splicing. A number of isoforms are produced. According to EST sequences.
Q9CAZ7-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length371
- Mass (Da)41,642
- Last updated2001-06-01 v1
- ChecksumAA33CD77BF218763
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
F4J3D0 | F4J3D0_ARATH | YLS2 | 369 |
Sequence caution
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AB047805 EMBL· GenBank· DDBJ | BAB32882.1 EMBL· GenBank· DDBJ | mRNA | ||
AL133452 EMBL· GenBank· DDBJ | CAB63007.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002686 EMBL· GenBank· DDBJ | AEE78791.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AY065039 EMBL· GenBank· DDBJ | AAL57676.1 EMBL· GenBank· DDBJ | mRNA | ||
AF462858 EMBL· GenBank· DDBJ | AAL58944.1 EMBL· GenBank· DDBJ | mRNA | ||
BT010753 EMBL· GenBank· DDBJ | AAR23723.1 EMBL· GenBank· DDBJ | mRNA | ||
AY087326 EMBL· GenBank· DDBJ | AAM64876.1 EMBL· GenBank· DDBJ | mRNA |