P16556 · NODD_RHILE

Function

function

NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers.

Features

Showing features for dna binding.

132250100150200250300
TypeIDPosition(s)Description
DNA binding23-42H-T-H motif

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionDNA binding
Molecular FunctionDNA-binding transcription factor activity
Biological Processnodulation

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Nodulation protein D

Gene names

    • Name
      nodD

Encoded on

  • Plasmid sym pRle1001a

Organism names

  • Taxonomic identifier
  • Strain
    • 1001
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Rhizobium/Agrobacterium group > Rhizobium

Accessions

  • Primary accession
    P16556

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00001057151-322Nodulation protein D

Structure

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain6-63HTH lysR-type

Sequence similarities

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    322
  • Mass (Da)
    37,109
  • Last updated
    1990-08-01 v1
  • Checksum
    0BC79B3D88754AC9
MRFKGLDLNLLVALDRLMTERKLTAAARAINLSQPAMSAAISRWRDYFRDDLFIIQRRELNPTPAAEPLAPVVREALLHIQLSVIAWDPINPAEFDRRFRIILSDFMALVFFEKIIVRLAREAPGVSFKLLPLDDDPEELLRRGDVDFLILPDLFMSGAHRKARLFEERLVCVGCSTNEQLQGKLFLEQYMSMGHVAAKFGRGLKPSVEQWLLLQQGLKRRIELVVPGFNLIPPLLSGTNRIATIPLRLVKHYEQTIPLRIIEHPLPLLSFTEAVQWPALHNSDPGNIWMREIMIQEASRHWNPRPKVVRLKRPRSFHSRSS

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
J03671
EMBL· GenBank· DDBJ
AAA26299.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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