M1ETK3 · MYB1W_BETVU
- ProteinTranscription factor MYB1
- GeneMYB1
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids224 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score2/5
Function
function
Activates DODA1 and CYP76AD1 in the betalain red pigment pathway.
Features
Showing features for dna binding.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 38-62 | H-T-H motif | ||||
Sequence: WKRVPERAGLNRCRKSCRWRWLNYL | ||||||
DNA binding | 90-113 | H-T-H motif | ||||
Sequence: WSLIAAKLPGRTINDVKNYCNTHL |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameTranscription factor MYB1
- Short namesBvMYB1
- Alternative names
Gene names
Organism names
- Organism
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > Caryophyllales > Chenopodiaceae > Betoideae > Beta
Accessions
- Primary accessionM1ETK3
Subcellular Location
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000431980 | 1-224 | Transcription factor MYB1 | |||
Sequence: MYQNSEAGSLGRVVKGSWSDEEDDLLRKCIQKYGEGNWKRVPERAGLNRCRKSCRWRWLNYLKPSIKRGHFNEDEVKFIIQQHKLLGNRWSLIAAKLPGRTINDVKNYCNTHLYKKHSIENIPAPATNTMTHNTSSCVERPESSAAIKEPTWWENILVELQREEKEGKSQNCSGLDFEQDNLGQQDPNINDGMDQWLNSLREVPNLSYQWEENLLDFDVVNLWA |
Expression
Induction
This recessive y allele is expressed at low levels, resulting in an inner white flesh of the beet. However, yy plants still can make pigments but never make as much of it or have it in the same location as YY or Yy plants with an inner red flesh.
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 10-66 | HTH myb-type 1 | ||||
Sequence: LGRVVKGSWSDEEDDLLRKCIQKYGEGNWKRVPERAGLNRCRKSCRWRWLNYLKPSI | ||||||
Domain | 67-117 | HTH myb-type 2 | ||||
Sequence: KRGHFNEDEVKFIIQQHKLLGNRWSLIAAKLPGRTINDVKNYCNTHLYKKH |
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length224
- Mass (Da)26,121
- Last updated2013-05-01 v1
- Checksum66480307324EE5B2