F2D276 · CSPL2_HORVV
- ProteinCASP-like protein 4B2
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids203 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | plasma membrane |
Names & Taxonomy
Protein names
- Recommended nameCASP-like protein 4B2
- Short namesHvCASPL4B2
Organism names
- Strain
- Taxonomic lineagecellular organisms > Eukaryota (eucaryotes) > Viridiplantae > Streptophyta > Streptophytina > Embryophyta > Tracheophyta > Euphyllophyta > Spermatophyta > Magnoliopsida (flowering plants) > Mesangiospermae > Liliopsida (monocotyledons) > Petrosaviidae > commelinids > Poales > Poaceae > BOP clade > Pooideae > Triticodae > Triticeae > Hordeinae > Hordeum > Hordeum vulgare (Barley)
Accessions
- Primary accessionF2D276
Proteomes
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Cell membrane ; Multi-pass membrane protein
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Topological domain | 1-57 | Cytoplasmic | ||||
Sequence: MAMVTADASAAADAATKQPDVEKDYSSYNGASTAGAGGGGVVESVVARWRREDMLDK | ||||||
Transmembrane | 58-78 | Helical | ||||
Sequence: CPLALHAAAAAFAFVALVLVA | ||||||
Topological domain | 79-92 | Extracellular | ||||
Sequence: SNQHGDWMQFDRYQ | ||||||
Transmembrane | 93-113 | Helical | ||||
Sequence: EYMYLLAIAALAFAYSLAQAL | ||||||
Topological domain | 114-135 | Cytoplasmic | ||||
Sequence: RHAHRMRGGADPIPAPSARLFD | ||||||
Transmembrane | 136-156 | Helical | ||||
Sequence: FIADQVVAYLLMSALSAAIPI | ||||||
Topological domain | 157-171 | Extracellular | ||||
Sequence: TNRMRTAVINNFTDA | ||||||
Transmembrane | 172-192 | Helical | ||||
Sequence: TAAAISMAFLAFVALALSATV | ||||||
Topological domain | 193-203 | Cytoplasmic | ||||
Sequence: SGYKLSRQMYM |
Keywords
- Cellular component
PTM/Processing
Features
Showing features for chain, glycosylation.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000417769 | 1-203 | CASP-like protein 4B2 | |||
Sequence: MAMVTADASAAADAATKQPDVEKDYSSYNGASTAGAGGGGVVESVVARWRREDMLDKCPLALHAAAAAFAFVALVLVASNQHGDWMQFDRYQEYMYLLAIAALAFAYSLAQALRHAHRMRGGADPIPAPSARLFDFIADQVVAYLLMSALSAAIPITNRMRTAVINNFTDATAAAISMAFLAFVALALSATVSGYKLSRQMYM | ||||||
Glycosylation | 167 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N |
Keywords
- PTM
Proteomic databases
Expression
Gene expression databases
Interaction
Structure
Family & Domains
Sequence similarities
Belongs to the Casparian strip membrane proteins (CASP) family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length203
- Mass (Da)21,613
- Last updated2011-05-31 v1
- Checksum55C28292F29796AD
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AK357983 EMBL· GenBank· DDBJ | BAJ89197.1 EMBL· GenBank· DDBJ | mRNA |