A0A832LW39 · A0A832LW39_9BACT

Function

function

Binds the 23S rRNA.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Cofactor

Zn2+ (UniProtKB | Rhea| CHEBI:29105 )

Note: Binds 1 zinc ion per subunit.

Features

Showing features for binding site.

17310203040506070
MKKNIHPEYYDDAVIRCACGNEIRVGSTRKEIRVEVCSKCHPFFTGETRFVDTEGKIEKFMKKYAQFYKKEEA
TypeIDPosition(s)Description
Binding site17Zn2+ (UniProtKB | ChEBI)
Binding site19Zn2+ (UniProtKB | ChEBI)
Binding site37Zn2+ (UniProtKB | ChEBI)
Binding site40Zn2+ (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentribonucleoprotein complex
Cellular Componentribosome
Molecular Functionmetal ion binding
Molecular FunctionrRNA binding
Molecular Functionstructural constituent of ribosome
Biological Processtranslation

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Large ribosomal subunit protein bL31

Gene names

    • Name
      rpmE
    • ORF names
      ENT73_02765

Organism names

  • Taxonomic identifier
  • Strain
    • SpSt-605
  • Taxonomic lineage
    Bacteria > Thermodesulfobacteriota > Thermodesulfobacteria > Thermodesulfobacteriales > Thermodesulfobacteriaceae > Caldimicrobium

Accessions

  • Primary accession
    A0A832LW39

Subcellular Location

Interaction

Subunit

Part of the 50S ribosomal subunit.

Family & Domains

Sequence similarities

Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    73
  • Mass (Da)
    8,629
  • Last updated
    2021-09-29 v1
  • Checksum
    9B8A87CFF5B65AD8
MKKNIHPEYYDDAVIRCACGNEIRVGSTRKEIRVEVCSKCHPFFTGETRFVDTEGKIEKFMKKYAQFYKKEEA

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
DSZU01000044
EMBL· GenBank· DDBJ
HGV54999.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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