A0A7L1H5E2 · A0A7L1H5E2_9CHAR

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentadherens junction
Cellular Componentearly endosome membrane
Cellular Componentfilamentous actin
Cellular Componentlamellipodium
Cellular Componentperinuclear region of cytoplasm
Cellular Componentrecycling endosome membrane
Cellular Componentstress fiber
Cellular Componentsynapse
Cellular ComponentZ disc
Molecular Functionactin binding
Molecular Functionmetal ion binding
Molecular Functionmuscle alpha-actinin binding
Biological Processactin cytoskeleton organization
Biological Processheart development
Biological Processmuscle structure development

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    PDZ and LIM domain protein 4

Gene names

    • Name
      Pdlim4
    • ORF names
      NYCSEM_R01186

Organism names

  • Taxonomic identifier
  • Strain
    • B10K-DU-002-14
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Archelosauria > Archosauria > Dinosauria > Saurischia > Theropoda > Coelurosauria > Aves > Neognathae > Charadriiformes > Rostratulidae > Nycticryphes

Accessions

  • Primary accession
    A0A7L1H5E2

Proteomes

Subcellular Location

Cell projection, lamellipodium
Cytoplasm, cytoskeleton
Cytoplasm, perinuclear region
Early endosome membrane
; Peripheral membrane protein
Endosome membrane
; Peripheral membrane protein
Recycling endosome membrane
; Peripheral membrane protein
Synapse, synaptosome

Keywords

  • Cellular component

Family & Domains

Features

Showing features for domain, region.

TypeIDPosition(s)Description
Domain8-84PDZ
Region106-137Disordered
Domain253-312LIM zinc-binding

Keywords

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    330
  • Mass (Da)
    36,158
  • Last updated
    2021-04-07 v1
  • Checksum
    E2C61CEFCECC9323
MSHSVVLRGPSPWGFRLVGGKDFSAPLTISRINPGSKAAMANLCPGDIILAINGESTENMTHLEAQNKIKACMDQLLLSLNRAEGKTWSPPVLEDGKAQAYRINIEPEPQDNGPAQSRRSMSHGAGGNPVDTKQMVNPQHHHPTRLYANSGSEAALPGQLSGLHLSPVQSLDPLKSLPRNRNGIDVESDVYKMLQDYEKPISEPKQSGSFRYLQGMLEAGENGEKLDKLSNPRNIKPPVSKLGGAMSGLQMLPECTRCGNGIVGTIVKARDKLYHPECFMCDDCGLNLKQRGYFFIEEQLYCETHAKERVKPPEGYDVVAVYPNAKVELV

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1
Non-terminal residue330

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
VXBJ01000668
EMBL· GenBank· DDBJ
NXN21468.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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