A0A7K8NCP5 · A0A7K8NCP5_CASCA

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Features

Showing features for dna binding.

130720406080100120140160180200220240260280300
TypeIDPosition(s)Description
DNA binding126-185Homeobox

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA binding
Molecular Functionzinc ion binding
Biological Processneuron differentiation

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    LIM/homeobox protein Lhx5

Gene names

    • Name
      Lhx5
    • ORF names
      CASCAS_R10499

Organism names

  • Taxonomic identifier
  • Strain
    • B10K-LSUMZ-50683
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Archelosauria > Archosauria > Dinosauria > Saurischia > Theropoda > Coelurosauria > Aves > Palaeognathae > Casuariiformes > Casuariidae > Casuarius

Accessions

  • Primary accession
    A0A7K8NCP5

Proteomes

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain5-67LIM zinc-binding
Region85-132Disordered
Compositional bias94-125Basic and acidic residues
Domain124-184Homeobox
Region237-307Disordered
Compositional bias249-267Polar residues
Compositional bias278-298Polar residues

Keywords

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    307
  • Mass (Da)
    34,089
  • Last updated
    2021-04-07 v1
  • Checksum
    3E7643DD61454AD9
RRFGTKCAGCSQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYIIDENKFGGVHLSPKSSAPPPFPFWVSFTVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFPHGPPSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQSNSGYSGALSHPNQELSEAAVW

Features

Showing features for non-terminal residue, compositional bias.

TypeIDPosition(s)Description
Non-terminal residue1
Compositional bias94-125Basic and acidic residues
Compositional bias249-267Polar residues
Compositional bias278-298Polar residues
Non-terminal residue307

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
VWPT01000082
EMBL· GenBank· DDBJ
NXE50988.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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