A0A662YMI0 · A0A662YMI0_ACIRT
- ProteinTrinucleotide repeat-containing gene 6C protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1186 (go to sequence)
- Protein existencePredicted
- Annotation score1/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleoplasm | |
Cellular Component | P-body | |
Molecular Function | RNA binding | |
Biological Process | miRNA-mediated post-transcriptional gene silencing | |
Biological Process | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | |
Biological Process | regulation of translation |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Chondrostei > Acipenseriformes > Acipenseridae > Acipenser
Accessions
- Primary accessionA0A662YMI0
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-114 | Disordered | ||||
Sequence: PSSPHPANPSVTPPIPTVSSSGNGKRAPPSAQQQQQQQPPPAAPRFPPREVPPRFRQQEHKQLLKRGQPLPAGTLATTGQPGASSPPQTPASPSKQHTELPHQSGLGTQYENLH | ||||||
Compositional bias | 14-39 | Polar residues | ||||
Sequence: PIPTVSSSGNGKRAPPSAQQQQQQQP | ||||||
Compositional bias | 73-114 | Polar residues | ||||
Sequence: GTLATTGQPGASSPPQTPASPSKQHTELPHQSGLGTQYENLH | ||||||
Compositional bias | 171-201 | Polar residues | ||||
Sequence: GAGQQSHFSAHHPSSKNSSNHSENMVSNQGG | ||||||
Region | 171-232 | Disordered | ||||
Sequence: GAGQQSHFSAHHPSSKNSSNHSENMVSNQGGASRGWGAGPTHCPSAISSEGKTDSMPMGGRG | ||||||
Region | 260-1035 | Disordered | ||||
Sequence: EGAGMGGGGPGGNNPPPPLNLCSPASAPSVQERGGSMGSTNGNPVGGSGNSAWGSILPPDPTESRHSPSTNVSFSVEPQNLNTDGPNNTKQQSLSPIHGLPSWGSVPVDMGPLVQPQVNGEGGSVWGNGDAKPTGSKDSAWDSGPPSGPGILTPWGQGGSNAGAWGRSACSGGGDWGKHSSEAKGWETSDSPRQEQSVSWSNTPASEGSNDSLEGRSRRMERPHGELDAPPSLPRQDLDPRVLSNTGWGQTPVRQHTAWELEELARSDRKNDTGADSWSTGSSSSSSSGPPPAPATVSANPAAAHMSNSGGKGKGSSSNTSAAPGWGNPALVIATPASSQPSSSWGEALSKKAPSAPGGCAGSSNSTGPKGGMSWDQEEKSPSWDDPPAKPKPQSWGEGPKPGHGWGTGTSGGGDWGEPREEKKNDSSPGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGKHAASNSIHHHHHSSHAQNHSHAQSHSQSHSQTQSHNHTPGHSQSHTQNHSHTPSNTHNSPHEQTTPHQPSAPQNRSVLAGPGWGDLPSARPKPEPSWGEPVSPATAVDNGTSAWGKPPGSCGGWGDNPSDPSGPYGRVNPPSGPAPCKPASKSMQDGWGGSPDELGGWDREEGDVWNSATSQESNSPCSSWGNLPKKGPQK | ||||||
Compositional bias | 283-309 | Polar residues | ||||
Sequence: PASAPSVQERGGSMGSTNGNPVGGSGN | ||||||
Compositional bias | 321-358 | Polar residues | ||||
Sequence: TESRHSPSTNVSFSVEPQNLNTDGPNNTKQQSLSPIHG | ||||||
Compositional bias | 449-470 | Polar residues | ||||
Sequence: DSPRQEQSVSWSNTPASEGSND | ||||||
Compositional bias | 471-487 | Basic and acidic residues | ||||
Sequence: SLEGRSRRMERPHGELD | ||||||
Compositional bias | 518-532 | Basic and acidic residues | ||||
Sequence: WELEELARSDRKNDT | ||||||
Compositional bias | 533-552 | Polar residues | ||||
Sequence: GADSWSTGSSSSSSSGPPPA | ||||||
Compositional bias | 560-584 | Polar residues | ||||
Sequence: PAAAHMSNSGGKGKGSSSNTSAAPG | ||||||
Compositional bias | 592-608 | Polar residues | ||||
Sequence: IATPASSQPSSSWGEAL | ||||||
Compositional bias | 687-836 | Polar residues | ||||
Sequence: SPGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGKHA | ||||||
Compositional bias | 837-852 | Basic residues | ||||
Sequence: ASNSIHHHHHSSHAQN | ||||||
Compositional bias | 853-909 | Polar residues | ||||
Sequence: HSHAQSHSQSHSQTQSHNHTPGHSQSHTQNHSHTPSNTHNSPHEQTTPHQPSAPQNR | ||||||
Compositional bias | 1009-1027 | Polar residues | ||||
Sequence: VWNSATSQESNSPCSSWGN | ||||||
Domain | 1042-1087 | UBA | ||||
Sequence: KQDEAWILSRLIKQLTDMGFPREPAEEALKSNSMNLDQAMSALLEK | ||||||
Region | 1104-1186 | Disordered | ||||
Sequence: LLSKPLGCRPPAISKESSSDRSPFLDKDGETCPALGRNPSPRGGSPSPRQQRWITGPRPGGSPLAAVGGGGTTPPIRRGPTAG |
Family and domain databases
Sequence
- Sequence statusFragment
- Length1,186
- Mass (Da)121,541
- Last updated2020-04-22 v1
- ChecksumAD3CD056C15E966B
Features
Showing features for non-terminal residue, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Non-terminal residue | 1 | |||||
Sequence: P | ||||||
Compositional bias | 14-39 | Polar residues | ||||
Sequence: PIPTVSSSGNGKRAPPSAQQQQQQQP | ||||||
Compositional bias | 73-114 | Polar residues | ||||
Sequence: GTLATTGQPGASSPPQTPASPSKQHTELPHQSGLGTQYENLH | ||||||
Compositional bias | 171-201 | Polar residues | ||||
Sequence: GAGQQSHFSAHHPSSKNSSNHSENMVSNQGG | ||||||
Compositional bias | 283-309 | Polar residues | ||||
Sequence: PASAPSVQERGGSMGSTNGNPVGGSGN | ||||||
Compositional bias | 321-358 | Polar residues | ||||
Sequence: TESRHSPSTNVSFSVEPQNLNTDGPNNTKQQSLSPIHG | ||||||
Compositional bias | 449-470 | Polar residues | ||||
Sequence: DSPRQEQSVSWSNTPASEGSND | ||||||
Compositional bias | 471-487 | Basic and acidic residues | ||||
Sequence: SLEGRSRRMERPHGELD | ||||||
Compositional bias | 518-532 | Basic and acidic residues | ||||
Sequence: WELEELARSDRKNDT | ||||||
Compositional bias | 533-552 | Polar residues | ||||
Sequence: GADSWSTGSSSSSSSGPPPA | ||||||
Compositional bias | 560-584 | Polar residues | ||||
Sequence: PAAAHMSNSGGKGKGSSSNTSAAPG | ||||||
Compositional bias | 592-608 | Polar residues | ||||
Sequence: IATPASSQPSSSWGEAL | ||||||
Compositional bias | 687-836 | Polar residues | ||||
Sequence: SPGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGNAAASNNHGKHA | ||||||
Compositional bias | 837-852 | Basic residues | ||||
Sequence: ASNSIHHHHHSSHAQN | ||||||
Compositional bias | 853-909 | Polar residues | ||||
Sequence: HSHAQSHSQSHSQTQSHNHTPGHSQSHTQNHSHTPSNTHNSPHEQTTPHQPSAPQNR | ||||||
Compositional bias | 1009-1027 | Polar residues | ||||
Sequence: VWNSATSQESNSPCSSWGN |
Keywords
- Technical term