A0A5R9QLD3 · A0A5R9QLD3_9PSED

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Names & Taxonomy

Protein names

  • Submitted names
    • U32 family peptidase

Gene names

    • ORF names
      FAS41_28545

Organism names

  • Taxonomic identifier
  • Strain
    • LAM1902
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Accessions

  • Primary accession
    A0A5R9QLD3

Proteomes

Structure

Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Source Identifier Method Resolution Chain Positions Links
AlphaFold AF-A0A5R9QLD3-F1 Predicted 1-667 AlphaFold · Foldseek

3D structure databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain400-513Peptidase U32 collagenase

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    667
  • Mass (Da)
    74,334
  • Last updated
    2020-02-26 v1
  • Checksum
    81ACB707EF0B8519
MSLPKHHLELLSPARDVHIAREAILHGADAVYIGGPSFGARHNACNEVSDIAQLVEFAHRYHARVFTTINTILHDNELEPARALIHQLYDAGVDALIVQDLGIMELDIPPIELHASTQTDIRTLGRAKFLDQAGFSQLVLARELNLQEIRAIADETDAAIEFFIHGALCVAFSGQCNISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVAFEKHLLSMKDNNQSANLSALVDAGVRSFKIEGRYKDMGYVKNITAYYRQRLDGILAERPDLARASSGRTDHFFVPDPDKTFHRGSTDYFVSDRKIDIGAFDSPTFTGLPVGTVEKVGKRDLLVVTKDPLSNGDGLNVLVKREVVGFRANIAEPKGEFEEDGEKRYRYRVEPNEMPEGLYRLRPNHPLSRNLDHNWQQALQKTSAERRIGLSWVARLREERLELTATSEEGVTASVALDGPFGVANKPEQALDQLHDLLGQLGTTQYHADQIELDAPQAFFIPNSQLKSLRREAIEALTEARIQAHPRGGRKAETNPPPVYPESHLSFLYNVYNEKARAFYHRHGVQLIDAAYEAHEETGEVPVMITKHCLRFSFNLCPKQAKGVTGVRTKVQPMQLIHGDEVLTLKFDCKPCEMHVIGKIKGHILGLPQPGSEGVNTIVGQISPEDLLKTIRKPAH

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
SWDV01000054
EMBL· GenBank· DDBJ
TLX70267.1
EMBL· GenBank· DDBJ
Genomic DNA

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Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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