A0A5N5LNI9 · A0A5N5LNI9_9ROSI

  • Protein
    LOB domain-containing protein
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    1/5

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Names & Taxonomy

Protein names

  • Recommended name
    LOB domain-containing protein

Gene names

    • ORF names
      DKX38_012290

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • cv. br00
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Malpighiales > Salicaceae > Saliceae > Salix

Accessions

  • Primary accession
    A0A5N5LNI9

Proteomes

Structure

Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Source Identifier Method Resolution Chain Positions Links
AlphaFold AF-A0A5N5LNI9-F1 Predicted 1-221 AlphaFold · Foldseek

3D structure databases

Family & Domains

Features

Showing features for region, compositional bias, domain, coiled coil.

TypeIDPosition(s)Description
Region1-59Disordered
Compositional bias10-54Polar residues
Domain67-168LOB
Coiled coil147-174

Sequence similarities

Belongs to the LOB domain-containing protein family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    221
  • Mass (Da)
    24,077
  • Last updated
    2020-02-26 v1
  • Checksum
    42A96B0537E83778
MDMLEKPATMSSINAPSQFSYSPSSSSSPPSSHHSCPSAFPSPSKSNSLSLTSPSAVTPPPPPVVISPCAACKILRRRCVDKCVLAPYFPPTEPFKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAISQLQKQVSDLQAQLAKAQAEVVSVQCQQANLVALLCMEMKQSQQEPILQQHQYMDTSCFLDENNLGASWEPLWT

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias10-54Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
VDCV01000008
EMBL· GenBank· DDBJ
KAB5544178.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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