A0A317USB6 · A0A317USB6_ASPEC

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentmRNA cleavage and polyadenylation specificity factor complex
Biological ProcessmRNA processing

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Pre-mRNA polyadenylation factor Fip1 domain-containing protein

Gene names

    • ORF names
      BO83DRAFT_420653

Organism names

Accessions

  • Primary accession
    A0A317USB6

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-99Disordered
Compositional bias19-34Polar residues
Compositional bias37-58Acidic residues
Compositional bias80-99Polar residues
Domain157-198Pre-mRNA polyadenylation factor Fip1
Compositional bias220-245Pro residues
Region220-249Disordered
Region286-324Disordered

Sequence similarities

Belongs to the FIP1 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    324
  • Mass (Da)
    34,605
  • Last updated
    2018-10-10 v1
  • Checksum
    3ABE0B1FF2B55B04
MMMEDEDDDFYDPADAVPVTQHQNGSQHPPADSGPQDSNDAEEEEIEVEEDEDDFNIITEAPADAPPPEVPHPRHASLRAESQRPSSSADVSTISKSITPTVTPKLESVTPVPAAARPAVPQKPGSAYPPVHASNIDVHANPVHPATGKPIMLTDMDTDFPEDDKPWRRPGSDITDYFNYGFDEFTWASYVLKQQELRKEIGDQKKQLDDMQAFLNMGLPPMPGGPPGPGGPPGSAPPPMPGMPGMPDMSQEMMQGMLTSMMSQGLDPSSMDPMAFMQHAQAMMGGQPGAGGGQQGQPGFGGQGGGQAQMGYGGGFGRGRGRRW

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias19-34Polar residues
Compositional bias37-58Acidic residues
Compositional bias80-99Polar residues
Compositional bias220-245Pro residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
MSFU01000032
EMBL· GenBank· DDBJ
PWY64239.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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