A0A2Z6DX86 · A0A2Z6DX86_HYDTE

Function

function

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane
Molecular Functionprotein-transporting ATPase activity
Biological Processintracellular protein transmembrane transport
Biological Processprotein targeting
Biological Processprotein transport by the Sec complex

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Protein translocase subunit SecD

Gene names

    • Name
      secD
    • ORF names
      HPTL_0789

Organism names

Accessions

  • Primary accession
    A0A2Z6DX86

Proteomes

Subcellular Location

Cell membrane
; Multi-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane449-468Helical
Transmembrane473-493Helical
Transmembrane499-519Helical
Transmembrane553-570Helical
Transmembrane576-600Helical

Keywords

Interaction

Subunit

Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain1-109SecD export protein N-terminal TM
Domain235-294Protein translocase subunit SecDF P1
Domain312-427SecDF P1 head subdomain
Domain429-597Protein export membrane protein SecD/SecF C-terminal

Sequence similarities

Belongs to the SecD/SecF family. SecD subfamily.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    612
  • Mass (Da)
    66,008
  • Last updated
    2018-10-10 v1
  • Checksum
    90D373BB039502E5
MNRYPLWKSVLIVLVVIVGTIYALPNLFGEIPAVQVAPIKAGAPWDAAPVEARIRETLASAHLEATGFERDPDGLRILFAETETQLKARDLIDAALNPDPKKPRYIVALNLLPGAPKWLLAIGAKPMYLGLDLRGGVHFLLEVDMAGAIAQRLDALAADIRSTLRSERIRSLGIARQGNTIVARFSDPTTAQQARTVLTKTFPELAIDRQENGDETRLIARLTPSAEQKIREFALKQNITTLHNRINELGVAEPVIQQQGANRIVVQLPGVQDVAKAKDILGRTATLEVRLVDDTPGALEAALAGRVPPGTELLTERNGRPILVKRDVVLTGERLTDAQPGFDSQTQEPAVHLTLDAAGARIFRDVTRENVGKRMAILLIDRGVAEVVTAPVIRTEIGGGRVQISGAMTTAEARDIALLLRAGSLAAPMRIVEERTIGPSLGKENIERGVNATLYGFLAIALFMIVYYEVIGIVSVVALFVNLVLLIALLSLLQATLTLPGIAAVALTLGMAIDANVLINERIREELRAGVSPQLAIAAGYDRAFDTILDSNVTSLIAGLALLIFGWGPVRGFAVVHVLGILTSIFSAVLVSRWLVNLIYGGNKRISRIRIG

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP018558
EMBL· GenBank· DDBJ
BBD77057.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp