A0A2I4DPU8 · A0A2I4DPU8_JUGRE
- ProteinProtein SUPPRESSOR OF GENE SILENCING 3
- GeneLOC108982293
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids653 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Biological Process | defense response to virus | |
Biological Process | regulatory ncRNA-mediated gene silencing |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fagales > Juglandaceae > Juglans
Accessions
- Primary accessionA0A2I4DPU8
Proteomes
Genome annotation databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain, coiled coil.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-24 | Polar residues | ||||
Sequence: MSSVRGGDQSSKWKNVSEVNSPKV | ||||||
Region | 1-216 | Disordered | ||||
Sequence: MSSVRGGDQSSKWKNVSEVNSPKVDHLNNKMADINLNSEQDDGQWEVARKPKNRAGSSAAKQMGSQSSNNSRAWGNPNMGQKQWMRGNGAPGRASVNSWSTQTADSKRPAGRGQPRHQASTRGFEGNHVPPQPAIGPPLEHGWNWPAISVSTQSKGLEDGQLKDETILNSRHDNDVEADKDDNVDEAEDDDSDVMEDTDEDMSDDDDSDASQKSHN | ||||||
Compositional bias | 58-83 | Polar residues | ||||
Sequence: SAAKQMGSQSSNNSRAWGNPNMGQKQ | ||||||
Compositional bias | 93-108 | Polar residues | ||||
Sequence: RASVNSWSTQTADSKR | ||||||
Compositional bias | 158-178 | Basic and acidic residues | ||||
Sequence: EDGQLKDETILNSRHDNDVEA | ||||||
Compositional bias | 179-207 | Acidic residues | ||||
Sequence: DKDDNVDEAEDDDSDVMEDTDEDMSDDDD | ||||||
Domain | 248-286 | Zinc finger-XS | ||||
Sequence: CPACQGGPGAIDWYRGLQPLMTHAKTKGANRMKIHRELA | ||||||
Domain | 319-435 | XS | ||||
Sequence: DHEIIWPPMVVIMNTRLEQDENEKWVGMGNQELLDYFSSYAAIKARHSYGPQGHRGMSVLIFEASARGYLEAERLHKHFAEQGTDRDAWEHRRTRVLFYQGGKRQLYGYMAVKEDLD | ||||||
Coiled coil | 536-598 | |||||
Sequence: IKTIHESREAKEEDFEKLQQEERDKVKQLNENPSNADEYKLRVEEIEKYIKLQDREMEDFAEE |
Sequence similarities
Belongs to the SGS3 family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length653
- Mass (Da)75,639
- Last updated2018-02-28 v1
- ChecksumBD298CFD25E1BD6D
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-24 | Polar residues | ||||
Sequence: MSSVRGGDQSSKWKNVSEVNSPKV | ||||||
Compositional bias | 58-83 | Polar residues | ||||
Sequence: SAAKQMGSQSSNNSRAWGNPNMGQKQ | ||||||
Compositional bias | 93-108 | Polar residues | ||||
Sequence: RASVNSWSTQTADSKR | ||||||
Compositional bias | 158-178 | Basic and acidic residues | ||||
Sequence: EDGQLKDETILNSRHDNDVEA | ||||||
Compositional bias | 179-207 | Acidic residues | ||||
Sequence: DKDDNVDEAEDDDSDVMEDTDEDMSDDDD |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
LIHL02000006 EMBL· GenBank· DDBJ | KAF5469669.1 EMBL· GenBank· DDBJ | Genomic DNA |