A0A250Y7D1 · A0A250Y7D1_CASCN

Function

PTM/Processing

Keywords

Structure

Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Source Identifier Method Resolution Chain Positions Links
AlphaFold AF-A0A250Y7D1-F1 Predicted 1-1248 AlphaFold · Foldseek

3D structure databases

Family & Domains

Features

Showing features for region, compositional bias.

TypeIDPosition(s)Description
Region1-89Disordered
Compositional bias45-64Polar residues
Region104-486Disordered
Compositional bias105-132Basic and acidic residues
Compositional bias144-162Basic and acidic residues
Compositional bias188-205Basic and acidic residues
Compositional bias206-221Polar residues
Compositional bias276-293Basic and acidic residues
Compositional bias302-316Pro residues
Compositional bias325-363Pro residues
Compositional bias364-416Polar residues
Compositional bias429-451Polar residues
Compositional bias460-476Pro residues
Compositional bias770-791Polar residues
Region770-1006Disordered
Compositional bias817-851Basic and acidic residues
Compositional bias878-925Basic and acidic residues
Compositional bias948-982Basic and acidic residues
Region1106-1134Disordered
Region1200-1248Disordered

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,248
  • Mass (Da)
    136,656
  • Last updated
    2017-11-22 v1
  • Checksum
    41EB39013665D5F6
MDGPTRGHGLRKKRRSRSQRDRERRSRGGLGAGVAGGGGAGRTRAPSLASSSGSDKEDNGKPPSSTPSRPRPPRRKRRESTSAEEDIIDGFAMTSFVTFEALEKDVALKPQERVEKRQPPLTKKKREALTNGLSFHSKKSRLSHPHHYSSDRENDRNLCQHLGKRKKMPKGLRQLKPGQSSCRDSDSDSASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDTSSEKLFNTVTVNKDSELGVGTLPEHDSQDAGPIVPKISGLERSQEKSQDCCKEQIFEPVVLKDPRLQVPQPVPQPQAEPQLQAPSPDPNLVQRTEAPPQPPPPNTQPPQGPPEVQLQPAPQPQVQRPPRPQSPTQLLHQTLPPVQAHPAQSLSQPLSVYNSSSLSLNSLSSSRSSTPAKSQPAPPHLSHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPPPPPLTSGSLPVPGHPAGSTYSEQDILRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMFDKYPTKVDPFYRHSLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSAAGAAHPTGTPFGPPPHHSNFLNPAAHLEPFNRPSTFTGLAAVGGNAFGGLGNPSVTPNSVFGHKDGPSVQNLSNPHEPWNRLHRTPPSFPTPPPWLKPGDLERSASAAAHDRDRDVDKRDSSVSKDDKERDSVEKRHSGHPSPAPVLPVGALGHARGSTEQIRGHLNPETREKDKPKEREREHSEPRKDLAAEEHKAKEGHLPDKDGPGDEAKQPAARPPSPYARPSSTSGGREAEVPRKGEAAFEHPKKGPEVKVKEERKEDHDLPPEAAPPGPRPTEPPANSSASAGPLASVPMAVGVPGMHPMGSLGGLDRTRMMTPFMGLSPIPGGERFPYPSFHWDPMRDPLRDPYRELDLHRRDPLGRDFLLRGDPLHRLSAPRLYEAERSFRDREPHDYSHHHHHHHHHGPLVAGDPRREHERGHLDERERLQLLRDDYEPPRLHAVHPAAAALDGHLAHPGLLAPGLPSMHYPRISPTAGPQNGLLNKTPPAAALSAPPPLISTLGGRPGSPRRTTPLSAEVRDRPPSHTLKDIEAR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias45-64Polar residues
Compositional bias105-132Basic and acidic residues
Compositional bias144-162Basic and acidic residues
Compositional bias188-205Basic and acidic residues
Compositional bias206-221Polar residues
Compositional bias276-293Basic and acidic residues
Compositional bias302-316Pro residues
Compositional bias325-363Pro residues
Compositional bias364-416Polar residues
Compositional bias429-451Polar residues
Compositional bias460-476Pro residues
Compositional bias770-791Polar residues
Compositional bias817-851Basic and acidic residues
Compositional bias878-925Basic and acidic residues
Compositional bias948-982Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
GFFV01000459
EMBL· GenBank· DDBJ
JAV39486.1
EMBL· GenBank· DDBJ
Transcribed RNA

Similar Proteins

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