A0A1Z4EZM6 · A0A1Z4EZM6_9MYCO

Function

function

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.

Catalytic activity

Features

Showing features for active site.

129820406080100120140160180200220240260280
TypeIDPosition(s)Description
Active site44Nucleophile

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionRNA binding
Molecular FunctiontRNA pseudouridine(55) synthase activity
Biological ProcessmRNA pseudouridine synthesis
Biological ProcesstRNA pseudouridine synthesis

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    tRNA pseudouridine synthase B
  • EC number
  • Alternative names
    • tRNA pseudouridine(55) synthase
      (Psi55 synthase
      )
    • tRNA pseudouridylate synthase
    • tRNA-uridine isomerase

Gene names

    • Name
      truB
    • ORF names
      MSTE_03092

Organism names

Accessions

  • Primary accession
    A0A1Z4EZM6

Proteomes

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain29-182Pseudouridine synthase II N-terminal
Domain183-225tRNA pseudouridylate synthase B C-terminal
Domain239-294tRNA pseudouridine synthase II TruB subfamily 2 C-terminal

Sequence similarities

Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    298
  • Mass (Da)
    31,673
  • Last updated
    2017-09-27 v1
  • Checksum
    C7C6D442AA78C4AB
MTDPLSRAGLVIVDKPAGMTSHDVVSRCRRIFSTRKVGHAGTLDPMATGVLVIGIERATKIMGLLTLTTKSYAATVRFGQNTSTDDAEGEVLQTVSASHLTDTDIEAAVARLRGDIEQVPSSVSAIKVDGQRAYKLAREGQSVELAARPVRVSRFDVLAVRRPGDGYVDVDVEVDCSSGTYIRALARDAGAALGVGGHLTALRRTRVGDFSLDRARTLEELADDATLTLDLDTACRDGFPRRDLDVAEVDSVRNGRPLSAAGIEGTYAAVDADNRVIALLADKGSRTTSVVVLRPANL

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP018165
EMBL· GenBank· DDBJ
BAX98397.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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