A0A196SA54 · A0A196SA54_BLAHN

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Cofactor

Protein has several cofactor binding sites:
Mg2+ (UniProtKB | Rhea| CHEBI:18420 )

Mn2+ (UniProtKB | Rhea| CHEBI:29035 )

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionnucleotidyltransferase activity
Molecular FunctionRNA binding
Biological ProcessmRNA processing
Biological ProcessRNA 3'-end processing

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Pre-mRNA processing factor 38

Gene names

    • ORF names
      AV274_5412

Organism names

Accessions

  • Primary accession
    A0A196SA54

Proteomes

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-267Disordered
Compositional bias10-87Pro residues
Compositional bias94-244Pro residues
Domain490-511C2H2-type

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    879
  • Mass (Da)
    99,607
  • Last updated
    2016-10-05 v1
  • Checksum
    BD1BF0BBA4A31164
MLVQSSPQEELPPMPQPALVPKPRPQPPRAMPPPVQPAQPVVQPVPKPVAQPVPKPVAQPVPKPVAQPVPKPAVQSVPKPAVQPVQPAAPIPQTASKPVQPVPQHPTQPAQPAQSVPKPAPQPTQPVPKPVAQPTQPAPQPVPRPVAPPAPPAPHPVQPLQPLQPLQPVPRPTPQPLQSVPRPVAQPVPRPMPQPLPQPLHAPQPRPVPQPLSQPMPQPMPRSTPQPMPQPMPRSTPQPIPQPLRTPQVSHARPSPQPLDPFPREGPSMRIVPVMPSITATPAFANPGTEIDVSIVISEKDCVSDDWLGLFKSYQHQALKAITQRQIAKLHYTRIMSNGERFKKYSCRFYAPKHAGRYCFRYFHFNDYYSILDSNEIMVTIRGCDLDEAVDFVQQKINEPSMVSFNINSLHSTFQYVVDWNGWKHPDVLWRILFKLTDPLYETPVPDTYTTQVNSNLKYLLDLLMQQPYLRQQMSDAIFARLSSLVEHYCHICNVFIVDDTEMTAHMRDRHSLPPTCRLVPFSQPFINLLTKQCVLEFKSLCPQPSFYQTRENLINRLMAGFNSHKRFERSVINIYGSSNNGFGTDGSDIDLCLIDPSIDREKIMEIADEVAAILEEMHMEEIDKSRLHARIPVIRFEDPVTHIQSDLCFNNILPIRNTLLLKTYSFIDPRVRILGIIIKKWAKVNRLNNPILKTLSSYGFMLMLIHFLQSAVSPPDLPPNWNGLAPVAGASLPQMVVTSYEGVTYNTYFYQPRDLHLLNRFAQQNTMTVGELLIEFFYYYGYQFDYIHSVVTIRKQGVLDREEKCCDSIWKMMMQLCIEDPFEIDYDVAHVITPTSSSMIQEYFAKSYVMLMNMDAKLKDLNEPNILEELFNISMFKL

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias10-87Pro residues
Compositional bias94-244Pro residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
LXWW01000501
EMBL· GenBank· DDBJ
OAO12879.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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