A0A118JSZ7 · A0A118JSZ7_CYNCS
- ProteinSde2 N-terminal domain-containing protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids495 (go to sequence)
- Protein existenceInferred from homology
- Annotation score1/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Biological Process | mRNA processing | |
Biological Process | RNA splicing |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > asterids > campanulids > Asterales > Asteraceae > Carduoideae > Cardueae > Carduinae > Cynara
Accessions
- Primary accessionA0A118JSZ7
Proteomes
Genome annotation databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 42-117 | Ubiquitin-like | ||||
Sequence: YQVIAKLLDGKSRTLNFETPIISVSSIKAQIQKLTSISVQQQLLLCDGKTLFDDGVLYHGNSSPSTVHLLLRLRGG | ||||||
Region | 253-346 | Disordered | ||||
Sequence: MGKRKVDDSDSDDMDDEDSDDDMGQGNEKSVVIDNENQSDSNKEADGSLASVTGGKGEGESSVGCSSESASEEEKETVAKGQLESTKSSDSELP | ||||||
Compositional bias | 282-300 | Polar residues | ||||
Sequence: SVVIDNENQSDSNKEADGS | ||||||
Region | 372-415 | Disordered | ||||
Sequence: IEIEKSAKPELGDLEERESELPRASNVQEDGTTDEEAKISDPKV | ||||||
Compositional bias | 377-415 | Basic and acidic residues | ||||
Sequence: SAKPELGDLEERESELPRASNVQEDGTTDEEAKISDPKV |
Sequence similarities
Belongs to the SDE2 family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusFragment
- Length495
- Mass (Da)54,514
- Last updated2016-04-13 v1
- ChecksumBA1D9A9DD0DD35FA
Features
Showing features for non-terminal residue, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Non-terminal residue | 1 | |||||
Sequence: P | ||||||
Compositional bias | 282-300 | Polar residues | ||||
Sequence: SVVIDNENQSDSNKEADGS | ||||||
Compositional bias | 377-415 | Basic and acidic residues | ||||
Sequence: SAKPELGDLEERESELPRASNVQEDGTTDEEAKISDPKV |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
LEKV01005320 EMBL· GenBank· DDBJ | KVH89034.1 EMBL· GenBank· DDBJ | Genomic DNA |