A0A118JSZ7 · A0A118JSZ7_CYNCS

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentnucleus
Biological ProcessmRNA processing
Biological ProcessRNA splicing

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Sde2 N-terminal domain-containing protein

Gene names

    • ORF names
      Ccrd_008991

Organism names

Accessions

  • Primary accession
    A0A118JSZ7

Proteomes

Genome annotation databases

Subcellular Location

Keywords

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain42-117Ubiquitin-like
Region253-346Disordered
Compositional bias282-300Polar residues
Region372-415Disordered
Compositional bias377-415Basic and acidic residues

Sequence similarities

Belongs to the SDE2 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    495
  • Mass (Da)
    54,514
  • Last updated
    2016-04-13 v1
  • Checksum
    BA1D9A9DD0DD35FA
PLSSFLSLTFDQSVIQSELDRSKRFSVGIGSIVMEQSQSKIYQVIAKLLDGKSRTLNFETPIISVSSIKAQIQKLTSISVQQQLLLCDGKTLFDDGVLYHGNSSPSTVHLLLRLRGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKKMEEWLAEEKERKLEKVAEDFIKKKAKTVKKAGGGDGAEKYVEKYRKDSAKCMEEVDKSVRASLAGGFLKSKRKVVGEDVEDISGSKSKKLKIWMGKRKVDDSDSDDMDDEDSDDDMGQGNEKSVVIDNENQSDSNKEADGSLASVTGGKGEGESSVGCSSESASEEEKETVAKGQLESTKSSDSELPYCEAVDASVIHEEIILKNSNESTVPIEIEKSAKPELGDLEERESELPRASNVQEDGTTDEEAKISDPKVVIDEEKVSTKNVCPVLEKHLNFDEFNTAQEMEVLGMERLKSELQERELKCGGTLQERAARLFLLKTTPLDRLPKKLLAKK

Features

Showing features for non-terminal residue, compositional bias.

TypeIDPosition(s)Description
Non-terminal residue1
Compositional bias282-300Polar residues
Compositional bias377-415Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
LEKV01005320
EMBL· GenBank· DDBJ
KVH89034.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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