A0A0S2JH91 · A0A0S2JH91_9GAMM

  • Protein
    Ribosomal RNA large subunit methyltransferase M
  • Gene
    rlmM
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA.

Catalytic activity

Features

Showing features for binding site, active site.

136850100150200250300350
TypeIDPosition(s)Description
Binding site192S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site225-228S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site244S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site264S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site281S-adenosyl-L-methionine (UniProtKB | ChEBI)
Active site310Proton acceptor

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Molecular FunctionS-adenosylmethionine-dependent methyltransferase activity
Biological Processmethylation
Biological ProcessrRNA processing

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Ribosomal RNA large subunit methyltransferase M
  • EC number
  • Alternative names
    • 23S rRNA (cytidine2498-2'-O)-methyltransferase
    • 23S rRNA 2'-O-ribose methyltransferase RlmM

Gene names

    • Name
      rlmM
    • ORF names
      CMT41_12060

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • MT41
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Alteromonadales > Colwelliaceae > Colwellia

Accessions

  • Primary accession
    A0A0S2JH91

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

Monomer.

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain1-71RlmM ferredoxin-like
Domain85-167Ribosomal RNA large subunit methyltransferase M THUMP-like
Domain190-283Ribosomal RNA methyltransferase FtsJ

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    368
  • Mass (Da)
    42,202
  • Last updated
    2016-02-17 v1
  • Checksum
    0BD5B466B80CDE0E
MTSIVLFCRPGFEKECGAEIQEKAAWNEMYGYLELKKNKGIVFFHLQESEHGEALMNKLPLKRLIFARQWFVTVTDTLALPDYNRVEAIIEALGTEWQYSDLRMEMADDNDGKELSKFCRKLSVPLRQALRKKKLLTQKGNNSADDPDGAILHALFLSGQEVILGFSLVRNSSPHVMGIPRLKFPSASPSRSTLKLDEAFLFFIPRDEWGERLTSGMHAVDLGSAPGGWTYQLVRRGMMVTAIDNGAMAESLMATGQVKHKMMDGFKYIPMKHNVHWMVCDMIEKPQRVAKLMSEWLLKGYCKEAMFNLKLPMKGRYQQVTNDLQAIKDAFDEHNVKYELYAKHLYYDREEITVHARLLSPAPLKEKE

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP013145
EMBL· GenBank· DDBJ
ALO35375.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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